Introduction To Galaxy

Shaurya Jauhari, PhD
August 13th, 2020

What is Galaxy?

  • It is an integrative, biological data-analysis platform
  • IBDAP as in IDE (R Studio, Microsoft Visual Studio, Net Beans, etc.)

Installation

  • After successful installation, you can access port 8080 in a web browser
    • localhost:8080
    • ip-address:8080

Why Galaxy?

  • All under one-roof !
  • Intuitive

Interface

Example

Create an Account

Visualizations

Visualizations (Contd.)

Loading Data

Loading Data (Contd.)

  • For files over a network location (FTP)

History

  • Annotate your session

History (Contd.)

  • There is also a color representation for tasks in history

    • Red : Error
    • Orange : Work-In-Progress
    • Green : Successfully Completed
  • Icons for each entity
    • Eye : Viewing data/ Result from a tool's execution
    • Pencil : Editing the attributes; renaming, etc.
    • Cross : Delete

History (Contd.)

History (Contd.)

Example | Running a tool | Loading Data

Example | Running a tool | Loading Data (Contd.)

Example | Running a tool | Loading Data (Contd.)

Example | Running a tool | Loading Data (Contd.)

Example | Running a tool | Loading Data (Contd.)

Example | Running a tool | Loading Data (Contd.)

Example | Running a tool | Selecting Tool

Example | Running a tool | Selecting Tool (Contd.)

Example | Running a tool | Execution

Example | Running a tool | Execution (Contd.)

Thank You